Transcript: LRRC3-DT:15

Basic information

LNCipedia transcript ID: LRRC3-DT:15 
LNCipedia gene ID: LRRC3-DT
Location (hg38): chr21:44447323-44451336
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 340 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00029178; NONHSAT082519
Alternative gene names: XLOC_014118; linc-C21orf2-2;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -69.364 non-coding 
CPAT coding probability 0.57% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LRRC3-DT:15 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TSPEAR-1:3
3.1 lnc-TSPEAR-1:3
4.0 LRRC3-AS1:5
4.1 LRRC3-AS1:5
5.0 LRRC3-AS1:5
5.1 LRRC3-DT:8
5.2 LRRC3-DT:15