Transcript: LRRC8C-DT:54

Basic information

LNCipedia transcript ID: LRRC8C-DT:54 
LNCipedia gene ID: LRRC8C-DT
Location (hg38): chr1:89629172-89632205
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 3034 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT004368
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -56.6366 non-coding 
CPAT coding probability 2.76% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LRRC8C-DT:54 no no no no

Available literature

  1. Sun (2017), Identification of long non-coding RNAs biomarkers associated with progression of endometrial carcinoma and patient outcomes., Oncotarget


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GBP5-2:15
4.0 lnc-GBP5-2:15
4.1 lnc-GBP5-2:15
5.0 lnc-GBP5-2:15
5.1 LRRC8C-DT:27
5.2 LRRC8C-DT:54