Transcript: LY86-AS1:1

Basic information

LNCipedia transcript ID: LY86-AS1:1 
LNCipedia gene ID: LY86-AS1
RefSeq ID: NR_026970
Location (hg38): chr6:6346465-6622826
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2023 bp
Exons: 8
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT107540; NR_026970; NR_026970.1
Alternative gene names: FLJ33708; LY86-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -17.6654 non-coding 
CPAT coding probability 2.71% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LY86-AS1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-F13A1-1:5
4.0 LY86-AS1:1
4.1 LY86-AS1:1
5.0 LY86-AS1:1
5.1 LY86-AS1:1
5.2 LY86-AS1:1