Transcript: LY86-AS1:9

Basic information

LNCipedia transcript ID: LY86-AS1:9 
HGNC Gene Symbol: LY86-AS1    
HGNC Full Gene Name: LY86 antisense RNA 1
Ensembl Gene ID: ENSG00000216863
Ensembl Transcript ID: ENST00000606992
Location (hg38): chr6:6475306-6492984
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 545 bp
Exons: 2
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000606992.1
Alternative gene names: ENSG00000216863.5; LY86-AS1; ENSG00000216863.9; FLJ33708


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -234.5757 non-coding 
CPAT coding probability 15.63% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LY86-AS1:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-F13A1-1:9
4.0 LY86-AS1:9
4.1 LY86-AS1:9
5.0 LY86-AS1:9
5.1 LY86-AS1:9
5.2 LY86-AS1:9