Transcript: LYST-AS1:1

Basic information

LNCipedia transcript ID: LYST-AS1:1 
HGNC Gene Symbol: LYST-AS1    
HGNC Full Gene Name: LYST antisense RNA 1
Ensembl Gene ID: ENSG00000229463
Ensembl Transcript ID: ENST00000412098
Location (hg38): chr1:235839483-235840182
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 521 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT010381; ENST00000412098.2
Alternative gene names: ENSG00000229463.2; LYST-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -10.3954 non-coding 
CPAT coding probability 0.20% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LYST-AS1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GPR137B-9:1
4.0 LYST-AS1:1
4.1 LYST-AS1:1
5.0 LYST-AS1:1
5.1 LYST-AS1:1
5.2 LYST-AS1:1