Transcript: LZTS1-AS1:1

Basic information

LNCipedia transcript ID: LZTS1-AS1:1 
HGNC Gene Symbol: LZTS1-AS1    
HGNC Full Gene Name: LZTS1 antisense RNA 1
Ensembl Gene ID: ENSG00000253733
Ensembl Transcript ID: ENST00000523103
RefSeq ID: NR_047509
Location (hg38): chr8:20275773-20290458
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 892 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000523103; ENST00000523103.1; LZTS1-AS1-001; OTTHUMT00000375135.1; NONHSAT125394; NR_047509; NR_047509.1
Alternative gene names: ENSG00000253733; RP11-563N12.1; ENSG00000253733.1; LZTS1-AS1; OTTHUMG00000163745.1; ENSG00000253733.2; ENSG00000253733.3;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -84.7309 non-coding 
CPAT coding probability 1.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LZTS1-AS1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ATP6V1B2-1:1
3.1 lnc-ATP6V1B2-1:1
4.0 LZTS1-AS1:1
4.1 LZTS1-AS1:1
5.0 LZTS1-AS1:1
5.1 LZTS1-AS1:1
5.2 LZTS1-AS1:1