Transcript: MACC1-AS1:1

Basic information

LNCipedia transcript ID: MACC1-AS1:1 
HGNC Gene Symbol: MACC1-AS1    
HGNC Full Gene Name: MACC1 antisense RNA 1
Ensembl Gene ID: ENSG00000228598
Ensembl Transcript ID: ENST00000439285
RefSeq ID: NR_046756
Location (hg38): chr7:20141916-20153531
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 639 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000439285.1; MACC1-AS1-001; OTTHUMT00000326625.1; NONHSAT119409; NR_046756; NR_046756.1
Alternative gene names: ENSG00000228598.1; MACC1-AS1; OTTHUMG00000152534.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -257.6265 non-coding 
CPAT coding probability 2.11% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MACC1-AS1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ITGB8-3:1
4.0 MACC1-AS1:1
4.1 MACC1-AS1:1
5.0 MACC1-AS1:1
5.1 MACC1-AS1:1
5.2 MACC1-AS1:1