Transcript: MACROD2-AS1:3

Basic information

LNCipedia transcript ID: MACROD2-AS1:3 
LNCipedia gene ID: MACROD2-AS1
RefSeq ID: NR_072988
Location (hg38): chr20:14904941-14929518
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1233 bp
Exons: 2
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_072988; NR_072988.2
Alternative gene names: BA318C17.1; MACROD2-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -34.0284 non-coding 
CPAT coding probability 7.41% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MACROD2-AS1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FLRT3-1:3
4.0 MACROD2-AS1:3
4.1 MACROD2-AS1:3
5.0 MACROD2-AS1:3
5.1 MACROD2-AS1:3
5.2 MACROD2-AS1:3