Transcript: MAGEA4-AS1:6

Basic information

LNCipedia transcript ID: MAGEA4-AS1:6 
HGNC Gene Symbol: MAGEA4-AS1    
HGNC Full Gene Name: MAGEA4 antisense RNA 1
Ensembl Gene ID: ENSG00000229967
Ensembl Transcript ID: ENST00000424126
Location (hg38): chrX:151909453-151913968
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 800 bp
Exons: 5
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000424126.1; RP11-366F6.2-003; OTTHUMT00000060902.1; NONHSAT139018
Alternative gene names: ENSG00000229967.1; RP11-366F6.2; OTTHUMG00000024175.1; AF274855.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -10.8638 non-coding 
CPAT coding probability 4.63% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MAGEA4-AS1:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GABRE-1:1
4.0 lnc-GABRE-1:1
4.1 lnc-GABRE-1:1
5.0 lnc-GABRE-1:1
5.1 MAGEA4-AS1:2
5.2 MAGEA4-AS1:6