Transcript: MALINC1:72

Basic information

LNCipedia transcript ID: MALINC1:72 
LNCipedia gene ID: MALINC1
Location (hg38): chr5:140105464-140107671
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 757 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT104144
Alternative gene names: MA-linc1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -158.6431 non-coding 
CPAT coding probability 1.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MALINC1:72 no no no no

Available literature

  1. Bida (2015), A novel mitosis-associated lncRNA, MA-linc1, is required for cell cycle progression and sensitizes cancer cells to Paclitaxel., Oncotarget


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NRG2-1:13
4.0 LINC01024:9
4.1 LINC01024:9
5.0 LINC01024:9
5.1 MALINC1:34
5.2 MALINC1:72