Transcript: MANCR:22

Basic information

LNCipedia transcript ID: MANCR:22 
LNCipedia gene ID: MANCR
Location (hg38): chr10:4581143-4678222
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3925 bp
Exons: 6
Sources: NONCODE v4
Alternative transcript names: NONHSAT011101
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -15.4236 non-coding 
CPAT coding probability 3.91% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MANCR:22 no no no no

Available literature

  1. Tracy (2018), Mitotically-Associated lncRNA (MANCR) Affects Genomic Stability and Cell Division in Aggressive Breast Cancer., Mol. Cancer Res.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AKR1C2-4:6
4.0 LINC00704:1
4.1 LINC00704:1
5.0 LINC00704:1
5.1 MANCR:2
5.2 MANCR:22