Transcript: MANCR:25

Basic information

LNCipedia transcript ID: MANCR:25 
LNCipedia gene ID: MANCR
Location (hg38): chr10:4631125-4678214
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 7026 bp
Exons: 6
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000231298.2|ENCT00000052128.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 5.2377 non-coding 
CPAT coding probability 1.46% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MANCR:25 no no no no

Available literature

  1. Tracy (2018), Mitotically-Associated lncRNA (MANCR) Affects Genomic Stability and Cell Division in Aggressive Breast Cancer., Mol. Cancer Res.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 LINC00704:12
5.0 LINC00704:12
5.1 MANCR:5
5.2 MANCR:25