Transcript: MANCR:31

Basic information

LNCipedia transcript ID: MANCR:31 
LNCipedia gene ID: MANCR
Location (hg38): chr10:4651161-4678147
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 718 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000231298.2|ENST00000449712.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -15.4236 non-coding 
CPAT coding probability 2.13% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MANCR:31 no no no no

Available literature

  1. Tracy (2018), Mitotically-Associated lncRNA (MANCR) Affects Genomic Stability and Cell Division in Aggressive Breast Cancer., Mol. Cancer Res.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 LINC00704:16
5.0 LINC00704:16
5.1 MANCR:11
5.2 MANCR:31