Transcript: MAP3K20-AS1:24

Basic information

LNCipedia transcript ID: MAP3K20-AS1:24 
LNCipedia gene ID: MAP3K20-AS1
Location (hg38): chr2:173197713-173282036
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2537 bp
Exons: 8
Sources: Refseq - Dec 2014
Alternative transcript names: NR_033882
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 111.4021 coding 
CPAT coding probability 17.00% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
MAP3K20-AS1:24 no no no no

Available literature

  1. Ding (2014), Expression and clinical significance of the long non-coding RNA PVT1 in human gastric cancer., Onco Targets Ther
  2. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SP3-3:5
4.0 MLK7-AS1:3
4.1 MLK7-AS1:3
5.0 MLK7-AS1:3
5.1 MAP3K20-AS1:11
5.2 MAP3K20-AS1:24