Transcript: MBNL1-AS1:1

Basic information

LNCipedia transcript ID: MBNL1-AS1:1 
LNCipedia gene ID: MBNL1-AS1
RefSeq ID: NR_027038
Location (hg38): chr3:152262616-152269626
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 6656 bp
Exons: 2
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT092748; NR_027038; NR_027038.1
Alternative gene names: ; MBNL1-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 94.7939 coding 
CPAT coding probability 57.37% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
MBNL1-AS1:1 yes no no no

Available literature

  1. Tian (2017), Differentially Expressed lncRNAs in Gastric Cancer Patients: A Potential Biomarker for Gastric Cancer Prognosis., J Cancer


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC106722.1-2:2
4.0 MBNL1-AS1:1
4.1 MBNL1-AS1:1
5.0 MBNL1-AS1:1
5.1 MBNL1-AS1:1
5.2 MBNL1-AS1:1