Transcript: MCF2L-AS1:5

Basic information

LNCipedia transcript ID: MCF2L-AS1:5 
LNCipedia gene ID: MCF2L-AS1
RefSeq ID: NR_034002
Location (hg38): chr13:112967484-112968638
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1155 bp
Exons: 1
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_034002; NR_034002.1
Alternative gene names: ; MCF2L-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -0.868 non-coding 
CPAT coding probability 78.59% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
MCF2L-AS1:5 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PCID2-3:4
4.0 MCF2L-AS1:5
4.1 MCF2L-AS1:5
5.0 MCF2L-AS1:5
5.1 MCF2L-AS1:5
5.2 MCF2L-AS1:5