Transcript: MEG9:2

Basic information

LNCipedia transcript ID: MEG9:2 
LNCipedia gene ID: MEG9
Location (hg38): chr14:101069911-101072936
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2640 bp
Exons: 2
Sources: NONCODE v4; Refseq - Dec 2014
Alternative transcript names: NONHSAT039999; NR_047664
Alternative gene names: LINC00584


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -94.2939 non-coding 
CPAT coding probability 7.71% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MEG9:2 no no no no

Available literature

  1. Ichigozaki (2016), Serum long non-coding RNA, snoRNA host gene 5 level as a new tumor marker of malignant melanoma., Exp. Dermatol.
  2. Imam (2015), The lncRNA NRON modulates HIV-1 replication in a NFAT-dependent manner and is differentially regulated by early and late viral proteins., Sci Rep
  3. Shen (2015), Exploration of Deregulated Long Non-Coding RNAs in Association with Hepatocarcinogenesis and Survival., Cancers (Basel)
  4. Hagan (2009), At least ten genes define the imprinted Dlk1-Dio3 cluster on mouse chromosome 12qF1., PLoS ONE


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DLK1-11:5
4.0 MEG9:2
4.1 MEG9:2
5.0 MEG9:2
5.1 MEG9:2
5.2 MEG9:2