Transcript: MHENCR:17

Basic information

LNCipedia transcript ID: MHENCR:17 
LNCipedia gene ID: MHENCR
Location (hg38): chr20:63627089-63628823
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1735 bp
Exons: 1
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA857:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 73.0839 coding 
CPAT coding probability 48.20% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
MHENCR:17 no no no no

Available literature

  1. Chen (2017), Long noncoding RNA MHENCR promotes melanoma progression via regulating miR-425/489-mediated PI3K-Akt pathway., Am J Transl Res


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-RTEL1.1-3:2
4.1 lnc-RTEL1.1-3:2
5.0 lnc-RTEL1.1-3:2
5.1 MHENCR:4
5.2 MHENCR:17