Transcript: MHENCR:18

Basic information

LNCipedia transcript ID: MHENCR:18 
LNCipedia gene ID: MHENCR
Location (hg38): chr20:63627097-63629236
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2140 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT080906
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 73.0839 coding 
CPAT coding probability 47.64% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
MHENCR:18 no no no no

Available literature

  1. Chen (2017), Long noncoding RNA MHENCR promotes melanoma progression via regulating miR-425/489-mediated PI3K-Akt pathway., Am J Transl Res


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RTEL1.1-1:5
4.0 lnc-RTEL1.1-3:3
4.1 lnc-RTEL1.1-3:3
5.0 lnc-RTEL1.1-3:3
5.1 MHENCR:5
5.2 MHENCR:18