Transcript: MID1IP1-AS1:1

Basic information

LNCipedia transcript ID: MID1IP1-AS1:1 
HGNC Gene Symbol: MID1IP1-AS1    
HGNC Full Gene Name: MID1IP1 antisense RNA 1
Ensembl Gene ID: ENSG00000238123
Ensembl Transcript ID: ENST00000436893
Location (hg38): chrX:38801568-38803883
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 376 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000436893.1; MID1IP1-AS1-001; OTTHUMT00000060657.1; NONHSAT136657
Alternative gene names: ENSG00000238123.1; MID1IP1-AS1; OTTHUMG00000024093.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -1254.0135 non-coding 
CPAT coding probability 9.40% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MID1IP1-AS1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RPGR-2:1
4.0 MID1IP1-AS1:1
4.1 MID1IP1-AS1:1
5.0 MID1IP1-AS1:1
5.1 MID1IP1-AS1:1
5.2 MID1IP1-AS1:1