Transcript: MID1IP1-AS1:9

Basic information

LNCipedia transcript ID: MID1IP1-AS1:9 
LNCipedia gene ID: MID1IP1-AS1
Location (hg38): chrX:38780027-38800426
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 528 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00017307; NONHSAT136656
Alternative gene names: XLOC_008141; linc-RPGR-5;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -335.7251 non-coding 
CPAT coding probability 1.00% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MID1IP1-AS1:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RPGR-1:1
3.1 lnc-RPGR-1:1
4.0 lnc-RPGR-1:1
4.1 MID1IP1-AS1:9
5.0 MID1IP1-AS1:9
5.1 MID1IP1-AS1:9
5.2 MID1IP1-AS1:9