Transcript: MIF-AS1:6

Basic information

LNCipedia transcript ID: MIF-AS1:6 
LNCipedia gene ID: MIF-AS1
Location (hg38): chr22:23895829-23902114
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 912 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT084054
Alternative gene names: LOC284889; MIF-AS


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 13.9458 non-coding 
CPAT coding probability 0.40% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MIF-AS1:6 no no no no

Available literature

  1. Ma (2016), Association Between MIF-AS rs755622 and Nephrolithiasis Risk in a Chinese Population., Med. Sci. Monit.
  2. Jha (2013), Variations in ncRNA gene LOC284889 and MIF-794CATT repeats are associated with malaria susceptibility in Indian populations., Malar. J.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AP000350.4.1-1:5
4.0 MIF-AS1:6
4.1 MIF-AS1:6
5.0 MIF-AS1:6
5.1 MIF-AS1:6
5.2 MIF-AS1:6