Transcript: MIF-AS1:7

Basic information

LNCipedia transcript ID: MIF-AS1:7 
LNCipedia gene ID: MIF-AS1
RefSeq ID: NR_038911
Location (hg38): chr22:23893710-23898930
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2192 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_038911; NR_038911.1
Alternative gene names: LOC284889; MIF-AS; MIF-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -56.9476 non-coding 
CPAT coding probability 56.61% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
MIF-AS1:7 no no no no

Available literature

  1. Ma (2016), Association Between MIF-AS rs755622 and Nephrolithiasis Risk in a Chinese Population., Med. Sci. Monit.
  2. Jha (2013), Variations in ncRNA gene LOC284889 and MIF-794CATT repeats are associated with malaria susceptibility in Indian populations., Malar. J.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AP000350.4.1-1:6
4.0 MIF-AS1:7
4.1 MIF-AS1:7
5.0 MIF-AS1:7
5.1 MIF-AS1:7
5.2 MIF-AS1:7