Transcript: MIF-AS1:8

Basic information

LNCipedia transcript ID: MIF-AS1:8 
HGNC Gene Symbol: MIF-AS1    
HGNC Full Gene Name: MIF antisense RNA 1
Ensembl Gene ID: ENSG00000218537
Ensembl Transcript ID: ENST00000406213
Location (hg38): chr22:23894426-23898930
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1476 bp
Exons: 3
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000406213.1
Alternative gene names: ENSG00000218537.1; MIF-AS1; LOC284889; MIF-AS


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -59.341 non-coding 
CPAT coding probability 57.58% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
MIF-AS1:8 no no no no

Available literature

  1. Ma (2016), Association Between MIF-AS rs755622 and Nephrolithiasis Risk in a Chinese Population., Med. Sci. Monit.
  2. Jha (2013), Variations in ncRNA gene LOC284889 and MIF-794CATT repeats are associated with malaria susceptibility in Indian populations., Malar. J.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 MIF-AS1:8
4.1 MIF-AS1:8
5.0 MIF-AS1:8
5.1 MIF-AS1:8
5.2 MIF-AS1:8