Transcript: MIMT1:3

Basic information

LNCipedia transcript ID: MIMT1:3 
HGNC Gene Symbol: MIMT1    
HGNC Full Gene Name: MER1 repeat containing imprinted transcript 1
Ensembl Gene ID: ENSG00000268654
Ensembl Transcript ID: ENST00000599641
Location (hg38): chr19:56840902-56848556
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1290 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT068201; ENST00000599641.1
Alternative gene names: ENSG00000268654.1; MIMT1; MIM1; NCRNA00067; LINC00067


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -105.3126 non-coding 
CPAT coding probability 0.13% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MIMT1:3 no no no no

Available literature

  1. Kobayashi (2014), Imprinting genes associated with endometriosis., EXCLI J
  2. Kim (2007), Genomic organization and imprinting of the Peg3 domain in bovine., Genomics


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF71-3:3
4.0 MIMT1:3
4.1 MIMT1:3
5.0 MIMT1:3
5.1 MIMT1:3
5.2 MIMT1:3