Transcript: MIMT1:5

Basic information

LNCipedia transcript ID: MIMT1:5 
LNCipedia gene ID: MIMT1
Location (hg38): chr19:56840918-56842298
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1381 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000268654.1|ENST00000597105.1
Alternative gene names: MIM1; NCRNA00067; LINC00067


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -150.8997 non-coding 
CPAT coding probability 0.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MIMT1:5 no no no no

Available literature

  1. Kobayashi (2014), Imprinting genes associated with endometriosis., EXCLI J
  2. Kim (2007), Genomic organization and imprinting of the Peg3 domain in bovine., Genomics


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 MIMT1:5
5.0 MIMT1:5
5.1 MIMT1:5
5.2 MIMT1:5