Transcript: MIMT1:8

Basic information

LNCipedia transcript ID: MIMT1:8 
LNCipedia gene ID: MIMT1
Location (hg38): chr19:56840918-56849964
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2535 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000268654.1|ENCT00000208808.1
Alternative gene names: MIM1; NCRNA00067; LINC00067


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -2.5526 non-coding 
CPAT coding probability 0.11% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MIMT1:8 no no no no

Available literature

  1. Kobayashi (2014), Imprinting genes associated with endometriosis., EXCLI J
  2. Kim (2007), Genomic organization and imprinting of the Peg3 domain in bovine., Genomics


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 MIMT1:8
5.0 MIMT1:8
5.1 MIMT1:8
5.2 MIMT1:8