Transcript: MINCR:9

Basic information

LNCipedia transcript ID: MINCR:9 
LNCipedia gene ID: MINCR
Location (hg38): chr8:143280160-143281690
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 681 bp
Exons: 3
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA1380:3
Alternative gene names: TCONS_00015189


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -23.8621 non-coding 
CPAT coding probability 0.49% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MINCR:9 no no no no

Available literature

  1. Doose (2015), MINCR is a MYC-induced lncRNA able to modulate MYC's transcriptional network in Burkitt lymphoma cells., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 MINCR:9
4.1 MINCR:9
5.0 MINCR:9
5.1 MINCR:9
5.2 MINCR:9