Transcript: MIR155HG:2

Basic information

LNCipedia transcript ID: MIR155HG:2 
LNCipedia gene ID: MIR155HG
Location (hg38): chr21:25562074-25579032
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 5409 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT081499
Alternative gene names: BIC; NCRNA00172


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -4.7475 non-coding 
CPAT coding probability 2.66% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MIR155HG:2 no no no no

Available literature

  1. Liu (2015), Altered expression of long non-coding RNAs during genotoxic stress-induced cell death in human glioma cells., J. Neurooncol.
  2. Elton (2013), Regulation of the MIR155 host gene in physiological and pathological processes., Gene
  3. Vargova (2011), MYB transcriptionally regulates the miR-155 host gene in chronic lymphocytic leukemia., Blood


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-JAM2-2:2
4.0 MIR155HG:2
4.1 MIR155HG:2
5.0 MIR155HG:2
5.1 MIR155HG:2
5.2 MIR155HG:2