Transcript: MIR181A2HG:4

Basic information

LNCipedia transcript ID: MIR181A2HG:4 
HGNC Gene Symbol: MIR181A2HG    
HGNC Full Gene Name: MIR181A2 host gene
Ensembl Gene ID: ENSG00000224020
Ensembl Transcript ID: ENST00000429139
Location (hg38): chr9:124658467-124698631
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 662 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000429139.1; MIR181A2HG-001; OTTHUMT00000054033.1; NONHSAT134701
Alternative gene names: ENSG00000224020.1; MIR181A2HG; OTTHUMG00000020657.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -135.3407 non-coding 
CPAT coding probability 0.72% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MIR181A2HG:4 yes no no no

Available literature

  1. Lytle (2004), Solution structure of a ubiquitin-like domain from tubulin-binding cofactor B., J. Biol. Chem.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-OLFML2A-2:1
4.0 MIR181A2HG:4
4.1 MIR181A2HG:4
5.0 MIR181A2HG:4
5.1 MIR181A2HG:4
5.2 MIR181A2HG:4