Transcript: MIR194-2HG:1

Basic information

LNCipedia transcript ID: MIR194-2HG:1 
LNCipedia gene ID: MIR194-2HG
Location (hg38): chr11:64891426-64893449
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1781 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000413053; ENST00000413053.1; AP001187.9-001; OTTHUMT00000143253.1; NONHSAT022040
Alternative gene names: ENSG00000229719; AP001187.9; ENSG00000229719.1; OTTHUMG00000066834.1; ENSG00000229719.2; MIR194-2;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -6.6523 non-coding 
CPAT coding probability 2.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MIR194-2HG:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ATG2A-1:1
3.1 lnc-ATG2A-1:1
4.0 MIR194-2HG:1
4.1 MIR194-2HG:1
5.0 MIR194-2HG:1
5.1 MIR194-2HG:1
5.2 MIR194-2HG:1