Transcript: MIR202HG:1

Basic information

LNCipedia transcript ID: MIR202HG:1 
HGNC Gene Symbol: MIR202HG    
HGNC Full Gene Name: MIR202 host gene
Ensembl Gene ID: ENSG00000166917
Ensembl Transcript ID: ENST00000553459
Location (hg38): chr10:133246478-133247891
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 674 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000553459.1; RP13-49I15.5-002; OTTHUMT00000409805.1; NONHSAT017131
Alternative gene names: ENSG00000166917.6; RP13-49I15.5; OTTHUMG00000170605.1; ENSG00000166917.7; MIR202HG; ENSG00000166917.8; ; ENSG00000166917.9; ENSG00000166917.10


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 36.9229 non-coding 
CPAT coding probability 0.62% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MIR202HG:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ADAM8-1:1
4.0 MIR202HG:1
4.1 MIR202HG:1
5.0 MIR202HG:1
5.1 MIR202HG:1
5.2 MIR202HG:1