Transcript: MIR205HG:1

Basic information

LNCipedia transcript ID: MIR205HG:1 
HGNC Gene Symbol: MIR205HG    
HGNC Full Gene Name: MIR205 host gene
Ensembl Gene ID: ENSG00000230937
Ensembl Transcript ID: ENST00000433108
Location (hg38): chr1:209428820-209432545
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3348 bp
Exons: 2
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000433108; ENST00000433108.1; MIR205HG-001; OTTHUMT00000088231.1; NONHSAT009207
Alternative gene names: ENSG00000230937; CTA-55I10.1; ENSG00000230937.3; MIR205HG; OTTHUMG00000036267.3; ENSG00000230937.5; ENSG00000230937.9; LINC00510; ENSG00000230937.10; ENSG00000230937.11


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 38.8252 non-coding 
CPAT coding probability 16.70% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MIR205HG:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CAMK1G-1:1
3.1 lnc-CAMK1G-1:2
4.0 MIR205HG:1
4.1 MIR205HG:1
5.0 MIR205HG:1
5.1 MIR205HG:1
5.2 MIR205HG:1