Transcript: MIR205HG:4

Basic information

LNCipedia transcript ID: MIR205HG:4 
LNCipedia gene ID: MIR205HG
Location (hg38): chr1:209428823-209432545
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 888 bp
Exons: 4
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000366437; ENST00000366437.3; MIR205HG-201
Alternative gene names: ENSG00000230937; CTA-55I10.1; ENSG00000230937.3; MIR205HG; OTTHUMG00000036267.3; ENSG00000230937.5; LINC00510


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 38.8252 non-coding 
CPAT coding probability 28.77% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MIR205HG:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CAMK1G-1:3
3.1 lnc-CAMK1G-1:3
4.0 MIR205HG:4
4.1 MIR205HG:4
5.0 MIR205HG:4
5.1 MIR205HG:4
5.2 MIR205HG:4