Transcript: MIR205HG:5

Basic information

LNCipedia transcript ID: MIR205HG:5 
HGNC Gene Symbol: MIR205HG    
HGNC Full Gene Name: MIR205 host gene
Ensembl Gene ID: ENSG00000230937
Ensembl Transcript ID: ENST00000603283
Location (hg38): chr1:209428837-209432384
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 455 bp
Exons: 3
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT009210; ENST00000603283.1; ENST00000603283.5
Alternative gene names: ENSG00000230937.5; MIR205HG; ENSG00000230937.9; LINC00510; ENSG00000230937.10; ENSG00000230937.11


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 38.8252 non-coding 
CPAT coding probability 0.20% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MIR205HG:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CAMK1G-1:11
4.0 MIR205HG:5
4.1 MIR205HG:5
5.0 MIR205HG:5
5.1 MIR205HG:5
5.2 MIR205HG:5