Transcript: MIR210HG:1

Basic information

LNCipedia transcript ID: MIR210HG:1 
HGNC Gene Symbol: MIR210HG    
HGNC Full Gene Name: MIR210 host gene
Ensembl Gene ID: ENSG00000247095
Ensembl Transcript ID: ENST00000533920
Location (hg38): chr11:567144-568457
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 816 bp
Exons: 2
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000533920; ENST00000533920.1; MIR210HG-003; OTTHUMT00000383233.1
Alternative gene names: ENSG00000247095; MIR210HG; ENSG00000247095.2; OTTHUMG00000165284.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -196.2391 non-coding 
CPAT coding probability 1.51% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MIR210HG:1 no no no no

Available literature

  1. Liu (2017), CRISPRi-based genome-scale identification of functional long noncoding RNA loci in human cells., Science
  2. Min (2016), Long Noncoding RNA miR210HG as a Potential Biomarker for the Diagnosis of Glioma., PLoS ONE
  3. Lin (2015), The long noncoding RNA landscape in hypoxic and inflammatory renal epithelial injury., Am. J. Physiol. Renal Physiol.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C11orf35-1:1
3.1 lnc-C11orf35-2:1
4.0 MIR210HG:1
4.1 MIR210HG:1
5.0 MIR210HG:1
5.1 MIR210HG:1
5.2 MIR210HG:1