Transcript: MIR210HG:3

Basic information

LNCipedia transcript ID: MIR210HG:3 
LNCipedia gene ID: MIR210HG
RefSeq ID: NR_038262
Location (hg38): chr11:565657-568457
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2303 bp
Exons: 2
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT017279; NR_038262; NR_038262.1
Alternative gene names: ; MIR210HG


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 5.4464 non-coding 
CPAT coding probability 1.74% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MIR210HG:3 no no no no

Available literature

  1. Liu (2017), CRISPRi-based genome-scale identification of functional long noncoding RNA loci in human cells., Science
  2. Min (2016), Long Noncoding RNA miR210HG as a Potential Biomarker for the Diagnosis of Glioma., PLoS ONE
  3. Lin (2015), The long noncoding RNA landscape in hypoxic and inflammatory renal epithelial injury., Am. J. Physiol. Renal Physiol.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C11orf35-2:5
4.0 MIR210HG:3
4.1 MIR210HG:3
5.0 MIR210HG:3
5.1 MIR210HG:3
5.2 MIR210HG:3