Transcript: MIR2117HG:1

Basic information

LNCipedia transcript ID: MIR2117HG:1 
HGNC Gene Symbol: MIR2117HG    
HGNC Full Gene Name: MIR2117 host gene
Ensembl Gene ID: ENSG00000267151
Ensembl Transcript ID: ENST00000588060
Location (hg38): chr17:43444707-43451200
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 506 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT053860; ENST00000588060.1
Alternative gene names: ENSG00000267151.2; MIR2117; ENSG00000267151.3; MIR2117HG; ; ENSG00000267151.4; ENSG00000267151.5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 78.8029 coding 
CPAT coding probability 0.89% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
MIR2117HG:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DHX8-5:1
4.0 MIR2117HG:1
4.1 MIR2117HG:1
5.0 MIR2117HG:1
5.1 MIR2117HG:1
5.2 MIR2117HG:1