Transcript: MIR217HG:2

Basic information

LNCipedia transcript ID: MIR217HG:2 
LNCipedia gene ID: MIR217HG
RefSeq ID: NR_126406
Location (hg38): chr2:55963406-56047326
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 685 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_126406; NR_126406.1
Alternative gene names: MIR216AHG; MIR216BHG; MIR217HG


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -122.6358 non-coding 
CPAT coding probability 6.60% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MIR217HG:2 no no no no

Available literature

  1. Wang (2015), Expression profile of long non-coding RNAs in pancreatic cancer and their clinical significance as biomarkers., Oncotarget


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-EFEMP1-1:3
4.0 MIR217HG:2
4.1 MIR217HG:2
5.0 MIR217HG:2
5.1 MIR217HG:2
5.2 MIR217HG:2