Transcript: MIR29B2CHG:49

Basic information

LNCipedia transcript ID: MIR29B2CHG:49 
HGNC Gene Symbol: MIR29B2CHG    
HGNC Full Gene Name: MIR29B2 and MIR29C host gene
Ensembl Gene ID: ENSG00000203709
Ensembl Transcript ID: ENST00000637970
Location (hg38): chr1:207805247-207879096
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1170 bp
Exons: 8
Sources: Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000637970.1
Alternative gene names: ENSG00000203709.10; C1orf132; ENSG00000203709.11; MIR29B2CHG


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -46.6464 non-coding 
CPAT coding probability 13.27% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MIR29B2CHG:49 no no no no

Available literature

  1. Ota (2004), Complete sequencing and characterization of 21,243 full-length human cDNAs., Nat. Genet.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-C1orf132-1:9
5.0 lnc-C1orf132-1:9
5.1 MIR29B2CHG:2
5.2 MIR29B2CHG:49