Transcript: MIR29B2CHG:50

Basic information

LNCipedia transcript ID: MIR29B2CHG:50 
LNCipedia gene ID: MIR29B2CHG
Location (hg38): chr1:207877931-207879081
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 338 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT009157
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -46.6464 non-coding 
CPAT coding probability 0.25% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MIR29B2CHG:50 no no no no

Available literature

  1. Ota (2004), Complete sequencing and characterization of 21,243 full-length human cDNAs., Nat. Genet.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C1orf132-2:2
4.0 lnc-C1orf132-2:2
4.1 lnc-C1orf132-1:10
5.0 lnc-C1orf132-1:10
5.1 MIR29B2CHG:3
5.2 MIR29B2CHG:50