Transcript: MIR3142HG:4

Basic information

LNCipedia transcript ID: MIR3142HG:4 
HGNC Gene Symbol: MIR3142HG    
HGNC Full Gene Name: MIR3142 host gene
Ensembl Gene ID: ENSG00000253522
Ensembl Transcript ID: ENST00000642173
Location (hg38): chr5:160438594-160487426
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2204 bp
Exons: 2
Sources: Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000642173.1
Alternative gene names: ENSG00000253522.6; MIR3142HG


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -35.4678 non-coding 
CPAT coding probability 4.72% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MIR3142HG:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 MIR3142HG:4
5.1 MIR3142HG:4
5.2 MIR3142HG:4