Transcript: MIR34AHG:11

Basic information

LNCipedia transcript ID: MIR34AHG:11 
LNCipedia gene ID: MIR34AHG
Location (hg38): chr1:9168268-9202619
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 548 bp
Exons: 4
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000437157; ENST00000437157.1; RP3-510D11.1-001; OTTHUMT00000004910.1; NONHSAT000790
Alternative gene names: ENSG00000228526; RP3-510D11.1; ENSG00000228526.1; OTTHUMG00000001762.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -69.5021 non-coding 
CPAT coding probability 20.62% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MIR34AHG:11 no no no no

Available literature

  1. Chang (2007), Transactivation of miR-34a by p53 broadly influences gene expression and promotes apoptosis., Mol. Cell


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-GPR157-1:1
3.1 lnc-GPR157-1:1
4.0 lnc-GPR157-1:1
4.1 lnc-GPR157-1:1
5.0 lnc-GPR157-1:1
5.1 MIR34AHG:2
5.2 MIR34AHG:11