Transcript: MIR34AHG:16

Basic information

LNCipedia transcript ID: MIR34AHG:16 
HGNC Gene Symbol: MIR34AHG    
HGNC Full Gene Name: MIR34A host gene
Ensembl Gene ID: ENSG00000228526
Ensembl Transcript ID: ENST00000437157
Location (hg38): chr1:9182007-9183750
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 409 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000437157.3
Alternative gene names: ENSG00000228526.4; MIR34AHG; ENSG00000228526.5; MIR34A; ENSG00000228526.6; ENSG00000228526.7


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -69.5021 non-coding 
CPAT coding probability 21.59% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MIR34AHG:16 no no no no

Available literature

  1. Chang (2007), Transactivation of miR-34a by p53 broadly influences gene expression and promotes apoptosis., Mol. Cell


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-GPR157-1:5
4.1 lnc-GPR157-1:5
5.0 lnc-GPR157-1:5
5.1 MIR34AHG:8
5.2 MIR34AHG:16