Transcript: MIR3663HG:3

Basic information

LNCipedia transcript ID: MIR3663HG:3 
LNCipedia gene ID: MIR3663HG
RefSeq ID: NR_121651
Location (hg38): chr10:117153521-117169055
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 566 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_121651; NR_121651.1
Alternative gene names: ; MIR3663HG


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -92.4724 non-coding 
CPAT coding probability 1.26% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MIR3663HG:3 no no no no

Available literature

  1. Ma (2015), Fine-scale chromatin interaction maps reveal the cis-regulatory landscape of human lincRNA genes., Nat. Methods


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-VAX1-1:10
4.0 MIR3663HG:3
4.1 MIR3663HG:3
5.0 MIR3663HG:3
5.1 MIR3663HG:3
5.2 MIR3663HG:3