Transcript: MIR3681HG:11

Basic information

LNCipedia transcript ID: MIR3681HG:11 
HGNC Gene Symbol: MIR3681HG    
HGNC Full Gene Name: MIR3681 host gene
Ensembl Gene ID: ENSG00000224184
Ensembl Transcript ID: ENST00000449986
Location (hg38): chr2:12106584-12131548
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 478 bp
Exons: 3
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00002825; ENST00000449986; ENST00000449986.1; AC096559.1-004; OTTHUMT00000323600.1; NONHSAT069218
Alternative gene names: XLOC_001354; linc-TRIB2-2; ENSG00000224184; AC096559.1; ENSG00000224184.1; OTTHUMG00000151709.2; ENSG00000224184.5; MIR3681HG;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -73.2137 non-coding 
CPAT coding probability 4.27% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MIR3681HG:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-LPIN1-1:7
3.1 lnc-LPIN1-1:7
4.0 MIR3681HG:11
4.1 MIR3681HG:11
5.0 MIR3681HG:11
5.1 MIR3681HG:11
5.2 MIR3681HG:11