Transcript: MIR3681HG:5

Basic information

LNCipedia transcript ID: MIR3681HG:5 
HGNC Gene Symbol: MIR3681HG    
HGNC Full Gene Name: MIR3681 host gene
Ensembl Gene ID: ENSG00000224184
Ensembl Transcript ID: ENST00000451644
RefSeq ID: NR_110197
Location (hg38): chr2:12007116-12131585
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 623 bp
Exons: 4
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000451644; ENST00000451644.1; AC096559.1-003; OTTHUMT00000323599.1; NONHSAT069213; ENST00000451644.5; NR_110197.1
Alternative gene names: ENSG00000224184; AC096559.1; ENSG00000224184.1; OTTHUMG00000151709.2; ENSG00000224184.5; MIR3681HG;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -73.2137 non-coding 
CPAT coding probability 4.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MIR3681HG:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-LPIN1-1:4
3.1 lnc-LPIN1-1:4
4.0 MIR3681HG:5
4.1 MIR3681HG:5
5.0 MIR3681HG:5
5.1 MIR3681HG:5
5.2 MIR3681HG:5