Transcript: MIR3936HG:15

Basic information

LNCipedia transcript ID: MIR3936HG:15 
LNCipedia gene ID: MIR3936HG
Location (hg38): chr5:132362800-132369869
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2286 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000233006.2|HBMT00001168372.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 9.9609 non-coding 
CPAT coding probability 0.63% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MIR3936HG:15 yes no no no

Available literature

  1. He (2016), Epstein-Barr virus-encoded miR-BART6-3p inhibits cancer cell metastasis and invasion by targeting long non-coding RNA LOC553103., Cell Death Dis


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-P4HA2-2:14
5.0 lnc-P4HA2-2:14
5.1 MIR3936HG:5
5.2 MIR3936HG:15