Transcript: MIR3936HG:18

Basic information

LNCipedia transcript ID: MIR3936HG:18 
LNCipedia gene ID: MIR3936HG
Location (hg38): chr5:132366281-132369606
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 691 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000233006.2|ENST00000457998.2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -39.3059 non-coding 
CPAT coding probability 0.44% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MIR3936HG:18 no no no no

Available literature

  1. He (2016), Epstein-Barr virus-encoded miR-BART6-3p inhibits cancer cell metastasis and invasion by targeting long non-coding RNA LOC553103., Cell Death Dis


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-P4HA2-2:18
5.0 lnc-P4HA2-2:18
5.1 MIR3936HG:8
5.2 MIR3936HG:18