Transcript: MIR3936HG:4

Basic information

LNCipedia transcript ID: MIR3936HG:4 
LNCipedia gene ID: MIR3936HG
RefSeq ID: NR_110997
Location (hg38): chr5:132311276-132369916
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1802 bp
Exons: 8
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_110997.1
Alternative gene names: LOC553103


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score non-coding 
CPAT coding probability 0.86% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
MIR3936HG:4 no no no no

Available literature

  1. He (2016), Epstein-Barr virus-encoded miR-BART6-3p inhibits cancer cell metastasis and invasion by targeting long non-coding RNA LOC553103., Cell Death Dis


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 MIR3936HG:4
5.1 MIR3936HG:4
5.2 MIR3936HG:4